nichesphere.tl.processCTKRoutput

nichesphere.tl.processCTKRoutput(ctkrTbl)

Remove suffixes ‘|L’ , ‘|R’ and ‘|TF’ from cell - cell communication (CrossTalkeR) tables

Parameters:

ctkrTbl (pd.DataFrame) – Condition specific cell - cell communication table (output from CrossTalkeR)

Returns:

ctkrTbl – Same cell - cell communication table without the suffixes mentioned above

Return type:

pd.DataFrame