.. custom label for :ref: on the home page 
.. _api_tl:

tl module
---------

Helpful tools

.. autosummary::
   :toctree: generated
   :nosignatures:

   ~nichesphere.tl.PIC_BGdoubletsOEratios
   ~nichesphere.tl.PIC_BGdoubletsOEratios_parallel
   ~nichesphere.tl.assign_properties
   ~nichesphere.tl.cellCatContained
   ~nichesphere.tl.cells_niche_colors
   ~nichesphere.tl.compute_network_stats
   ~nichesphere.tl.downsample_class
   ~nichesphere.tl.getColocFilter
   ~nichesphere.tl.getExpectedColocProbsFromSCs
   ~nichesphere.tl.get_PIC_BG_OEratios_DF
   ~nichesphere.tl.get_pairCatDFdir
   ~nichesphere.tl.get_spatial_radius_BG_OEratios_DF
   ~nichesphere.tl.get_spot_ct_props
   ~nichesphere.tl.plot_top_stats
   ~nichesphere.tl.processCTKRoutput
   ~nichesphere.tl.pval_filtered_HMdf
   ~nichesphere.tl.unique